请问各位,用phylip软件构建进化树,若选择N-J法,DNADIST中有Kimura 2-parameter、Jin/Nei、Maximum-likelihood和Jukes-Cantor四种模式
最近用phylip构建进化树,采用N-J法kimura-2p模型构建,结果总是构出一个有根树,一个序列跑到外围去了。然后用MEGA构了一次,也是用N-J法kimura-2p模型构建,结果两个树的拓扑
Wakitani S, Kimura T, Hirooka A, et al:. J. Bone Joint Surg 71B:74-80, 1989Kimura,T., Yasui,N
求助原因:实验需要篇号:1 作者:Domeniconi M, Cao Z, Spencer T, Sivasankaran R, Wang K, Nikulina E, Kimura N, Cai
J Bone Joint Surg Br. 1989 Jan;71(1):74-80. Related Articles,.Wakitani S, Kimura T, Hirooka A, Ochi
篇号:1 作者:Saitoh A, Kimura M, Takahashi R, Yokoyama M, Nomura T, Izawa M, Sekiya T, Nishimura S
J Bone Joint Surg Br. 1989 Jan;71(1):74-80. Related Articles,.Wakitani S, Kimura T, Hirooka A, Ochi
Yamamoto, T.; Kimura, T.; Saito, T.; Kotobuki, K.; Matsuta, N.; Liebhard, R.; Gessler, C.; van
在看文献时 看到-2 parameter model [Kimura,1980]. The transition/transversion rate was set as 2.0.,000
我用NJ法构建系统发育树,遗传距离采用Kimura two-parameter distance, ts/tv=2.0.用Clustalx1.81和MEGA3.0画出的树遗传距离的标尺都是0.01
影响因子:6.091影响因子:5.84影响因子:5.626影响因子:4.659热门文章:On the inappropriate use of Kimura-2-parameter (K2P